STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ27930.1Bacillopeptidase F. (234 aa)    
Predicted Functional Partners:
KKQ27094.1
Hypothetical protein.
  
     0.655
KKQ27929.1
Hypothetical protein.
  
     0.651
KKQ29777.1
Foldase protein PrsA.
  
     0.628
KKQ28564.1
Hypothetical protein.
  
     0.583
KKQ27931.1
Orotidine 5'-phosphate decarboxylase.
       0.482
KKQ29822.1
Sortase family protein.
  
     0.468
KKQ27932.1
Hypothetical protein.
       0.468
KKQ27933.1
Orotate phosphoribosyltransferase.
       0.468
KKQ27934.1
Dihydroorotase.
       0.468
KKQ29895.1
CBS domain-containing protein.
  
     0.418
Your Current Organism:
Levybacteria bacterium GW2011GWA13716
NCBI taxonomy Id: 1618452
Other names: C. Levybacteria bacterium GW2011_GWA1_37_16, Candidatus Levybacteria bacterium GW2011_GWA1_37_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.