STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ27096.1Ribulose-phosphate 3-epimerase. (210 aa)    
Predicted Functional Partners:
KKQ29691.1
Ribose 5-phosphate isomerase.
  
 
 0.956
KKQ29696.1
Hypothetical protein.
 
  
 0.952
KKQ29689.1
Hypothetical protein.
  
 0.946
KKQ29697.1
Transketolase.
  
 
 0.933
KKQ29682.1
Triosephosphate isomerase.
 
 
 0.911
KKQ29879.1
Enolase.
   
 0.897
KKQ28705.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
    
 0.896
KKQ28478.1
Phosphomannomutase.
  
 
 0.888
KKQ26839.1
Thioredoxin reductase.
  
 
 0.845
KKQ29881.1
Hypothetical protein.
  
 
 0.818
Your Current Organism:
Levybacteria bacterium GW2011GWA13716
NCBI taxonomy Id: 1618452
Other names: C. Levybacteria bacterium GW2011_GWA1_37_16, Candidatus Levybacteria bacterium GW2011_GWA1_37_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.