STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKU18384.1CRP/FNR family transcription regulator. (234 aa)    
Predicted Functional Partners:
KKU18426.1
Hypothetical protein.
  
 0.951
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.919
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.907
KKU17626.1
Hypothetical protein.
   
 0.899
KKU17929.1
O-antigen polymerase.
   
 0.887
KKU17554.1
Hypothetical protein.
   
 0.887
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.879
KKU18069.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.849
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.841
KKU18490.1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
  0.836
Your Current Organism:
Pacebacteria bacterium GW2011GWA14610
NCBI taxonomy Id: 1618469
Other names: C. Pacebacteria bacterium GW2011_GWA1_46_10, Candidatus Pacebacteria bacterium GW2011_GWA1_46_10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.