STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKU18504.1Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family. (312 aa)    
Predicted Functional Partners:
KKU18355.1
Capsule synthesis protein, CapA.
      0.900
KKU18658.1
Bacterial cell division membrane protein; Belongs to the SEDS family.
 
  
 0.822
mraY
Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
 
 0.820
KKU18373.1
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase.
  
 
 0.819
KKU18493.1
Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase.
  
 
 0.784
KKU18652.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
    
 0.782
KKU18227.1
Hypothetical protein.
    
 0.746
KKU18234.1
Penicillin-binding protein.
    
 0.746
KKU18112.1
Penicillin-binding protein.
    
 0.746
aspS
Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
  
    0.739
Your Current Organism:
Pacebacteria bacterium GW2011GWA14610
NCBI taxonomy Id: 1618469
Other names: C. Pacebacteria bacterium GW2011_GWA1_46_10, Candidatus Pacebacteria bacterium GW2011_GWA1_46_10
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