node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KKU18042.1 | KKU18323.1 | UX28_C0002G0002 | UX28_C0001G0180 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L4. | 0.999 |
KKU18042.1 | rplB | UX28_C0002G0002 | UX28_C0001G0182 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
KKU18042.1 | rplM | UX28_C0002G0002 | UX28_C0001G0206 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
KKU18042.1 | rpsB | UX28_C0002G0002 | UX28_C0003G0026 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
KKU18042.1 | rpsF | UX28_C0002G0002 | UX28_C0003G0056 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
KKU18042.1 | rpsP | UX28_C0002G0002 | UX28_C0002G0081 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
KKU18042.1 | secY | UX28_C0002G0002 | UX28_C0001G0198 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.874 |
KKU18042.1 | trmD | UX28_C0002G0002 | UX28_C0001G0419 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.865 |
KKU18042.1 | tsf | UX28_C0002G0002 | UX28_C0003G0025 | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.886 |
KKU18323.1 | KKU18042.1 | UX28_C0001G0180 | UX28_C0002G0002 | 50S ribosomal protein L4. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |
KKU18323.1 | rplB | UX28_C0001G0180 | UX28_C0001G0182 | 50S ribosomal protein L4. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
KKU18323.1 | rplM | UX28_C0001G0180 | UX28_C0001G0206 | 50S ribosomal protein L4. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
KKU18323.1 | rpsB | UX28_C0001G0180 | UX28_C0003G0026 | 50S ribosomal protein L4. | 30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
KKU18323.1 | rpsF | UX28_C0001G0180 | UX28_C0003G0056 | 50S ribosomal protein L4. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
KKU18323.1 | rpsP | UX28_C0001G0180 | UX28_C0002G0081 | 50S ribosomal protein L4. | 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |
KKU18323.1 | secY | UX28_C0001G0180 | UX28_C0001G0198 | 50S ribosomal protein L4. | Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. | 0.999 |
KKU18323.1 | trmD | UX28_C0001G0180 | UX28_C0001G0419 | 50S ribosomal protein L4. | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.774 |
KKU18323.1 | tsf | UX28_C0001G0180 | UX28_C0003G0025 | 50S ribosomal protein L4. | Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.887 |
KKU18563.1 | trmD | UX28_C0001G0420 | UX28_C0001G0419 | Hypothetical protein. | tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.773 |
rplB | KKU18042.1 | UX28_C0001G0182 | UX28_C0002G0002 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.999 |