STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKU18564.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (291 aa)    
Predicted Functional Partners:
KKU18403.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.985
KKU18566.1
dTDP-glucose 4,6-dehydratase RfbB1; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.967
KKU18208.1
Undecaprenyl-phosphate galactose phosphotransferase.
  
 
 0.925
KKU18205.1
NAD-dependent epimerase/dehydratase.
  
 
 0.882
KKU18519.1
Nucleotidyl transferase.
  
 
 0.864
KKU18565.1
5'-nucleotidase SurE.
 
    0.804
KKU18152.1
Hypothetical protein.
  
 0.744
KKU18375.1
Hypothetical protein.
  
 0.744
KKU18560.1
NAD-dependent epimerase/dehydratase.
  
 0.744
KKU18588.1
UDP-glucose 4-epimerase.
  
 0.744
Your Current Organism:
Pacebacteria bacterium GW2011GWA14610
NCBI taxonomy Id: 1618469
Other names: C. Pacebacteria bacterium GW2011_GWA1_46_10, Candidatus Pacebacteria bacterium GW2011_GWA1_46_10
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