STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ70160.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
KKQ69566.1
UbiA prenyltransferase.
  
 
 0.907
tsaD
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.903
cysS
Cysteine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
 0.881
KKQ69621.1
Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
  
 
 0.869
KKQ69680.1
Hypothetical protein.
    
 0.867
KKQ69407.1
Putative rRNA maturation factor.
  
 0.850
KKQ71369.1
Methyltransferase type 11.
  
 0.845
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
    
 0.808
KKQ70161.1
Hypothetical protein.
       0.781
KKQ71688.1
Hypothetical protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
    
  0.779
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.