STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ69863.1Helicase protein. (468 aa)    
Predicted Functional Partners:
KKQ69778.1
ATP-dependent DNA helicase RecG.
 
    
0.927
KKQ69864.1
Penicillin-binding protein.
       0.545
KKQ71068.1
tRNA guanosine-2'-O-methyltransferase.
 
  
 0.529
KKQ69157.1
Topoisomerase protein; Belongs to the type IA topoisomerase family.
  
  
 0.497
KKQ70402.1
Polymerase protein.
     
 0.452
dnaG
Primase protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.448
KKQ69506.1
Hypothetical protein.
    
  0.435
KKQ71520.1
RNP-1 like protein RNA-binding protein.
    
  0.401
KKQ70472.1
RRM domain-containing RNA-binding protein.
    
  0.401
KKQ69687.1
Heterogeneous nuclear ribonucleoprotein HRP1.
    
  0.401
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.