STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ69502.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
KKQ69504.1
General secretory pathway protein E.
 
 0.997
KKQ69503.1
Twitching motility protein.
 
  
 0.918
KKQ69785.1
Type IV pilus assembly protein PilM.
   
 
 0.846
KKQ69561.1
Hypothetical protein.
   
 
 0.846
KKQ69562.1
Hypothetical protein.
   
 
 0.846
KKQ69501.1
Hypothetical protein.
  
  
 0.805
KKQ69500.1
Type 4 prepilin-like protein leader peptide processing enzyme.
 
  
 0.786
KKQ68765.1
Hypothetical protein.
   
   0.755
KKQ70121.1
Uptake protein.
  
  
 0.705
KKQ70122.1
Internalization-related competence protein ComEC/Rec2 protein.
  
  
 0.676
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.