STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ69161.1Penicillin-binding protein 2. (545 aa)    
Predicted Functional Partners:
KKQ68775.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
 0.997
KKQ68782.1
Stage V sporulation protein E; Belongs to the SEDS family.
 0.995
KKQ71716.1
Hypothetical protein.
 
 
 0.962
KKQ69162.1
Cell shape determining protein, MreB/Mrl family.
 
 0.944
KKQ69661.1
D-Ala-D-Ala carboxypeptidase.
  
 
 0.878
KKQ69864.1
Penicillin-binding protein.
 
 
 0.837
KKQ71717.1
Penicillin-binding protein, 1A family.
 
 
 0.834
KKQ67771.1
Peptidoglycan glycosyltransferase.
  
 
0.808
KKQ69170.1
Hypothetical protein.
  
 
 0.755
KKQ68781.1
Hypothetical protein.
  
 
 0.755
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.