STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ68764.1ArsR family transcriptional regulator YozA. (100 aa)    
Predicted Functional Partners:
KKQ68763.1
Nucleoside diphosphate kinase.
    
  0.876
KKQ70151.1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
    
  0.735
KKQ68765.1
Hypothetical protein.
     
 0.675
KKQ71049.1
Copper-translocating P-type ATPase.
  
  
 0.654
KKQ71369.1
Methyltransferase type 11.
    
 0.653
KKQ68784.1
ThrC-like protein probable threonine synthase.
    
 0.554
KKQ71551.1
Orotate phosphoribosyltransferase.
    
  0.507
KKQ70160.1
Hypothetical protein.
     
 0.478
KKQ67823.1
Two-component sensor kinase.
  
  
 0.426
KKQ70464.1
Permease.
  
  
 0.423
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.