STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ68775.1Rod shape-determining protein RodA; Belongs to the SEDS family. (309 aa)    
Predicted Functional Partners:
KKQ69161.1
Penicillin-binding protein 2.
 0.997
KKQ67771.1
Peptidoglycan glycosyltransferase.
 0.986
KKQ70483.1
Nucleotidyltransferase/DNA polymerase involved in DNA repair.
  
 
 0.858
KKQ69661.1
D-Ala-D-Ala carboxypeptidase.
    
 0.853
KKQ71716.1
Hypothetical protein.
   
 0.844
KKQ68787.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 
 0.842
KKQ67767.1
UDP-N-acetylmuramate-alanine ligase.
 
 
 0.828
KKQ71723.1
Glycosyl transferase, family 4, conserved region.
  
 
 0.811
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.811
KKQ68781.1
Hypothetical protein.
 
  
 0.764
Your Current Organism:
Shapirobacteria bacterium GW2011GWE23830
NCBI taxonomy Id: 1618490
Other names: C. Shapirobacteria bacterium GW2011_GWE2_38_30, Candidatus Shapirobacteria bacterium GW2011_GWE2_38_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.