STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ29953.1FemAB family protein. (346 aa)    
Predicted Functional Partners:
KKQ31697.1
UDP-N-acetylmuramyl-tripeptide synthetase.
  
 
 0.812
KKQ31542.1
Hypothetical protein.
 
 
 0.795
KKQ31541.1
Hypothetical protein.
 
 
 0.785
KKQ29954.1
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C.
       0.775
KKQ29955.1
glutamyl-tRNA(Gln) amidotransferase subunit A protein.
       0.773
KKQ31708.1
Hypothetical protein.
  
 
 0.754
KKQ29952.1
ATP-dependent DNA helicase PcrA.
       0.754
KKQ31484.1
UDP-N-acetylenolpyruvoylglucosamine reductase.
    
 0.688
KKQ29949.1
NAD-dependent epimerase/dehydratase.
       0.685
KKQ29950.1
Membrane-associated phospholipid phosphatase.
       0.648
Your Current Organism:
Shapirobacteria bacterium GW2011GWF23720
NCBI taxonomy Id: 1618492
Other names: C. Shapirobacteria bacterium GW2011_GWF2_37_20, Candidatus Shapirobacteria bacterium GW2011_GWF2_37_20
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