STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT77862.1L-lysine 2,3-aminomutase. (324 aa)    
Predicted Functional Partners:
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
 0.748
KKT77820.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
   
   0.697
KKT77686.1
Phosphoribosylamine-glycine ligase-like protein.
    
  0.595
KKT77923.1
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.
  
 
  0.554
KKT77266.1
Peptidase M20.
  
 
  0.554
KKT77270.1
Peptidase M20.
  
 
  0.554
KKT77863.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
       0.517
KKT77861.1
Hypothetical protein.
       0.415
Your Current Organism:
Microgenomates group bacterium GW2011GWB1448
NCBI taxonomy Id: 1618505
Other names: M. group bacterium GW2011_GWB1_44_8, Microgenomates group bacterium GW2011_GWB1_44_8
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