STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT76823.1Agmatine deiminase; Belongs to the agmatine deiminase family. (374 aa)    
Predicted Functional Partners:
KKT76827.1
Agmatinase 1; Belongs to the arginase family.
    
 0.861
KKT76829.1
Hypothetical protein.
    
  0.830
KKT78242.1
Spermine synthase.
    
 0.662
secA-2
Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.542
KKT76828.1
Deoxyhypusine synthase.
       0.532
KKT76824.1
Hypothetical protein.
       0.498
KKT76825.1
Hypothetical protein.
       0.476
KKT76826.1
Hypothetical protein.
       0.476
gatA
Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
    
  0.437
Your Current Organism:
Microgenomates group bacterium GW2011GWB1448
NCBI taxonomy Id: 1618505
Other names: M. group bacterium GW2011_GWB1_44_8, Microgenomates group bacterium GW2011_GWB1_44_8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.