STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKU89041.1General secretory pathway protein E. (583 aa)    
Predicted Functional Partners:
KKU89039.1
Type IV pilus inner membrane protein PilC.
 
 
 0.994
KKU89040.1
Twitching motility protein.
 
 
0.961
KKU89300.1
Hypothetical protein.
  
 
 0.937
KKU89038.1
Hypothetical protein.
  
 0.865
KKU89037.1
Type 4 prepilin-like protein leader peptide-processing enzyme.
 
 
 0.815
KKU87885.1
Type IV pilus assembly protein PilM, nonfunctional.
  
 
 0.805
KKU87880.1
Type II secretion system protein G.
  
 0.761
KKU87883.1
Hypothetical protein.
  
 0.761
KKU87881.1
Hypothetical protein.
  
 0.747
KKU87882.1
General secretion pathway protein G.
  
 0.747
Your Current Organism:
Microgenomates group bacterium GW2011GWF2479
NCBI taxonomy Id: 1618541
Other names: M. group bacterium GW2011_GWF2_47_9, Microgenomates group bacterium GW2011_GWF2_47_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.