STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKP48604.1Histone family protein DNA-binding protein. (91 aa)    
Predicted Functional Partners:
KKP47286.1
Chromosomal replication initiator protein DnaA.
   
 0.875
KKP48608.1
tRNA delta(2)-isopentenylpyrophosphate transferase.
  
   0.826
KKP48609.1
Hypothetical protein.
     
 0.794
KKP48812.1
Single-stranded DNA-binding protein.
  
 
 0.792
KKP48603.1
Ribonuclease Y.
       0.789
KKP48824.1
Replicative DNA helicase.
  
 
 0.786
KKP47875.1
Polymerase III, alpha subunit protein.
  
 0.779
KKP48133.1
Primase protein.
    
 0.775
KKP48511.1
30S ribosomal protein S20.
  
  
 0.742
KKP47285.1
Polymerase III, beta subunit protein.
  
 
 0.727
Your Current Organism:
Woesebacteria bacterium GW2011GWA13330
NCBI taxonomy Id: 1618542
Other names: C. Woesebacteria bacterium GW2011_GWA1_33_30, Candidatus Woesebacteria bacterium GW2011_GWA1_33_30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.