STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKP47301.1ABC transporter, substrate-binding protein. (442 aa)    
Predicted Functional Partners:
KKP47302.1
Hypothetical protein.
 
     0.909
KKP47848.1
Extracellular solute-binding protein family 5.
  
  
 0.769
KKP46920.1
Two component sensor histidine kinase.
    
 0.747
KKP47300.1
Hypothetical protein.
 
     0.711
KKP48793.1
Polymerase III subunit gamma and tau protein.
   
  0.706
KKP48794.1
Polymerase III, subunit gamma and tau protein.
   
  0.706
KKP48855.1
Hypothetical protein.
   
  0.706
KKP47304.1
60 kDa chaperonin 2.
     
 0.689
KKP47303.1
Co-chaperonin GroES.
     
 0.656
KKP48594.1
Secretion protein HlyD.
  
 
 0.645
Your Current Organism:
Woesebacteria bacterium GW2011GWA13330
NCBI taxonomy Id: 1618542
Other names: C. Woesebacteria bacterium GW2011_GWA1_33_30, Candidatus Woesebacteria bacterium GW2011_GWA1_33_30
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