STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR11273.1Type IV secretory pathway VirB4 component-like protein. (730 aa)    
Predicted Functional Partners:
KKR11272.1
Hypothetical protein.
 
  
 0.915
KKR11856.1
Hypothetical protein.
 
  
 0.816
KKR09829.1
Hypothetical protein.
 
  
 0.813
KKR11274.1
Hypothetical protein.
       0.762
topA
Topoisomerase protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]
  
  
 0.753
KKR11275.1
Hypothetical protein.
       0.658
KKR11667.1
Cell division FtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.475
KKR11529.1
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
    
   0.444
Your Current Organism:
Woesebacteria bacterium GW2011GWA13921
NCBI taxonomy Id: 1618550
Other names: C. Woesebacteria bacterium GW2011_GWA1_39_21, Candidatus Woesebacteria bacterium GW2011_GWA1_39_21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.