STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR51615.1tRNA-dihydrouridine synthase. (317 aa)    
Predicted Functional Partners:
KKR54303.1
Prolyl-tRNA synthetase.
  
 
 0.812
KKR53242.1
Aspartyl-tRNA synthetase.
  
 
  0.793
KKR51616.1
Isoleucyl-tRNA synthetase.
  
    0.694
KKR51617.1
Rod shape-determining protein RodA.
       0.682
KKR53371.1
Phenylalanine-tRNA ligase beta subunit.
  
  
 0.658
KKR51618.1
Bacterial cell division membrane protein FtsW.
       0.617
KKR51619.1
50S ribosomal protein L21.
  
    0.602
KKR51614.1
Hypothetical protein.
       0.558
KKR52972.1
tRNA (guanine-N(1)-)-methyltransferase.
  
  
 0.526
KKR53324.1
tRNA/rRNA methyltransferase.
  
  
 0.502
Your Current Organism:
Woesebacteria bacterium GW2011GWD24019
NCBI taxonomy Id: 1618595
Other names: C. Woesebacteria bacterium GW2011_GWD2_40_19, Candidatus Woesebacteria bacterium GW2011_GWD2_40_19
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