Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KKW37254.1 | KKW37753.1 | UY86_C0013G0009 | UY86_C0004G0082 | Sugar kinase, ribokinase family. | Translation initiation factor IF-2 protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.420 |
| KKW37254.1 | KKW38082.1 | UY86_C0013G0009 | UY86_C0001G0055 | Sugar kinase, ribokinase family. | tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family. | 0.839 |
| KKW37377.1 | KKW37734.1 | UY86_C0009G0011 | UY86_C0004G0063 | Nucleoside diphosphate kinase. | RNA binding S1 domain protein. | 0.912 |
| KKW37377.1 | KKW37753.1 | UY86_C0009G0011 | UY86_C0004G0082 | Nucleoside diphosphate kinase. | Translation initiation factor IF-2 protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.946 |
| KKW37377.1 | KKW38082.1 | UY86_C0009G0011 | UY86_C0001G0055 | Nucleoside diphosphate kinase. | tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family. | 0.743 |
| KKW37377.1 | rpoC | UY86_C0009G0011 | UY86_C0001G0048 | Nucleoside diphosphate kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.672 |
| KKW37377.1 | rpsO | UY86_C0009G0011 | UY86_C0006G0013 | Nucleoside diphosphate kinase. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.995 |
| KKW37675.1 | KKW37734.1 | UY86_C0004G0004 | UY86_C0004G0063 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | RNA binding S1 domain protein. | 0.959 |
| KKW37675.1 | KKW37753.1 | UY86_C0004G0004 | UY86_C0004G0082 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2 protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.565 |
| KKW37675.1 | KKW38082.1 | UY86_C0004G0004 | UY86_C0001G0055 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family. | 0.833 |
| KKW37675.1 | rpoC | UY86_C0004G0004 | UY86_C0001G0048 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.966 |
| KKW37675.1 | rpsO | UY86_C0004G0004 | UY86_C0006G0013 | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.888 |
| KKW37734.1 | KKW37377.1 | UY86_C0004G0063 | UY86_C0009G0011 | RNA binding S1 domain protein. | Nucleoside diphosphate kinase. | 0.912 |
| KKW37734.1 | KKW37675.1 | UY86_C0004G0063 | UY86_C0004G0004 | RNA binding S1 domain protein. | ATP-dependent RNA helicase RhlE; Belongs to the DEAD box helicase family. | 0.959 |
| KKW37734.1 | KKW37753.1 | UY86_C0004G0063 | UY86_C0004G0082 | RNA binding S1 domain protein. | Translation initiation factor IF-2 protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.710 |
| KKW37734.1 | KKW37825.1 | UY86_C0004G0063 | UY86_C0003G0047 | RNA binding S1 domain protein. | Hypothetical protein. | 0.714 |
| KKW37734.1 | KKW38082.1 | UY86_C0004G0063 | UY86_C0001G0055 | RNA binding S1 domain protein. | tRNA pseudouridine synthase B; Belongs to the pseudouridine synthase TruB family. | 0.789 |
| KKW37734.1 | rpoC | UY86_C0004G0063 | UY86_C0001G0048 | RNA binding S1 domain protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| KKW37734.1 | rpsO | UY86_C0004G0063 | UY86_C0006G0013 | RNA binding S1 domain protein. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.998 |
| KKW37752.1 | KKW37753.1 | UY86_C0004G0081 | UY86_C0004G0082 | Ribosome-binding factor A. | Translation initiation factor IF-2 protein; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. | 0.958 |
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