STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM83824.1Two component transcriptional regulator, two-component system, OmpR family, response regulator. (134 aa)    
Predicted Functional Partners:
AKM84297.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.999
AKM84142.1
RND family efflux transporter MFP subunit.
  
  
 0.929
AKM83825.1
General secretion pathway protein E.
     
 0.771
AKM84260.1
Peptidase M23b.
  
 
 0.725
AKM84112.1
Hypothetical protein.
  
  
 0.715
AKM83779.1
TPR domain-containing protein.
  
  
 0.713
AKM83823.1
Twitching motility protein, twitching motility protein PilT.
  
  
 0.703
AKM83827.1
Hypothetical protein.
  
  
 0.695
AKM84170.1
Topoisomerase I, DNA topoisomerase I protein.
     
 0.664
polA
Polymerase I, DNA polymerase I protein.
  
  
 0.638
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.