STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM83894.1ABC-type branched-chain amino acid transport system, periplasmic component, branched-chain amino acid transport system substrate-binding protein. (358 aa)    
Predicted Functional Partners:
AKM83893.1
Fe(3+)-transporting ATPase, branched-chain amino acid transport system ATP-binding protein.
  
 
 0.990
AKM83897.1
Inner-membrane translocator, branched-chain amino acid transport system permease protein.
 
 
 0.989
AKM83898.1
Inner-membrane translocator, branched-chain amino acid transport system permease protein.
  
 
 0.986
AKM83896.1
ABC transporter-like protein.
  
 
 0.984
AKM83900.1
Extracellular ligand-binding receptor, branched-chain amino acid transport system substrate-binding protein.
  
  
 
0.929
AKM83903.1
Amino acid ABC transporter substrate-binding protein, branched-chain amino acid transport system substrate-binding protein.
  
  
 
0.929
AKM83901.1
Extracellular ligand-binding receptor, branched-chain amino acid transport system substrate-binding protein.
  
  
 
0.928
AKM83811.1
glutamyl-tRNA(Gln) amidotransferase subunit A, aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A.
  
 
 0.678
AKM84167.1
Family 5 extracellular solute-binding protein, peptide/nickel transport system substrate-binding protein.
  
 
 0.583
AKM83767.1
Antimicrobial peptide ABC transporter ATPase, putative ABC transport system ATP-binding protein.
   
 0.552
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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