STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84008.1Seg. (186 aa)    
Predicted Functional Partners:
pilM
Type 4 fimbrial biogenesis protein PilM, type IV pilus assembly protein PilM.
       0.773
AKM84007.1
Seg.
       0.773
AKM84009.1
Protein of unknown function with transmembrane region.
       0.773
AKM84010.1
Hypothetical protein.
       0.536
AKM84001.1
Glutaredoxin.
       0.508
AKM84002.1
P-loop containing nucleoside triphosphate hydrolase.
       0.508
AKM84003.1
Holliday junction resolvase YqgF, putative holliday junction resolvase.
       0.508
AKM84004.1
methionyl-tRNA synthetase, methionyl-tRNA synthetase.
       0.508
AKM84005.1
DedA family protein.
       0.508
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.