STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84063.1Ribosomal protein L29. (65 aa)    
Predicted Functional Partners:
AKM84064.1
30S ribosomal protein S17, small subunit ribosomal protein S17.
       0.757
rplP
50S ribosomal protein L16, large subunit ribosomal protein L16.
       0.720
rplN
50S ribosomal protein L14, large subunit ribosomal protein L14.
       0.591
AKM84061.1
30S ribosomal protein S3, small subunit ribosomal protein S3.
       0.571
rplX
50S ribosomal protein L24, large subunit ribosomal protein L24.
       0.540
AKM84067.1
50S ribosomal protein L5, large subunit ribosomal protein L5.
       0.538
AKM84060.1
50S ribosomal protein L22, large subunit ribosomal protein L22.
       0.508
AKM84059.1
30S ribosomal protein S19, small subunit ribosomal protein S19.
       0.504
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.