STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrSthreonyl-tRNA synthetase, threonyl-tRNA synthetase. (581 aa)    
Predicted Functional Partners:
rpsO
30S ribosomal protein S15, small subunit ribosomal protein S15.
  
 
 0.994
AKM84074.1
50S ribosomal protein L15, large subunit ribosomal protein L15.
   
 
 0.993
infB
Translation initiation factor IF-2, translation initiation factor IF-2.
  
 0.990
AKM84020.1
50S ribosomal protein L11, large subunit ribosomal protein L11.
  
 
 0.989
AKM84069.1
30S ribosomal protein S14, small subunit ribosomal protein S14.
   
 
 0.988
rplC
Ribosomal protein L3, large subunit ribosomal protein L3.
   
 
 0.986
AKM84060.1
50S ribosomal protein L22, large subunit ribosomal protein L22.
   
 
 0.985
rpmF
50S ribosomal protein L32, large subunit ribosomal protein L32.
  
   0.981
rplQ
Ribosomal protein L17, large subunit ribosomal protein L17.
   
   0.974
AKM84027.1
Isoleucyl-tRNA synthetase, isoleucyl-tRNA synthetase.
  
 0.963
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.