STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84220.1Hypothetical protein. (153 aa)    
Predicted Functional Partners:
scpA
Segregation and condensation protein A, segregation and condensation protein A.
  
 
 0.881
polA
Polymerase I, DNA polymerase I protein.
  
 0.867
infB
Translation initiation factor IF-2, translation initiation factor IF-2.
  
 
 0.817
AKM84385.1
DEAD/DEAH box helicase, ATP-dependent RNA helicase RhlE.
  
 0.816
AKM84357.1
Peptidyl-prolyl cis-trans isomerase, peptidylprolyl isomerase.
  
 0.814
AKM84170.1
Topoisomerase I, DNA topoisomerase I protein.
  
 
 0.737
AKM84122.1
Putative prolyl-tRNA synthetase, prolyl-tRNA synthetase.
  
 
 0.673
AKM84261.1
glutamyl-tRNA synthetase, glutamyl-tRNA synthetase.
   
 0.654
gyrB
Gyrase subunit B, DNA gyrase subunit B protein.
  
 
 0.621
AKM84218.1
Ribosome-binding factor A.
       0.594
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.