STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84286.1Hypothetical protein. (558 aa)    
Predicted Functional Partners:
AKM84287.1
General transcriptional co-repressor, acts together with Tup1p, glucose repression mediator protein.
 
     0.871
AKM83779.1
TPR domain-containing protein.
  
  
 0.804
AKM84263.1
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase, UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
  
 
 0.700
AKM84181.1
Rare lipoprotein a, rare lipoprotein A.
     
 0.644
polA
Polymerase I, DNA polymerase I protein.
     
 0.621
mrdB
Rod shape-determining protein RodA, rod shape determining protein RodA.
 
 
 0.610
AKM84180.1
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase, UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase.
     
 0.546
spoVE
Stage V sporulation protein E, cell division protein FtsW.
  
 
 0.539
tyrS
tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase.
  
    0.527
AKM84289.1
Hypothetical protein.
     
 0.473
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.