STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84296.1HAD-superfamily hydrolase. (224 aa)    
Predicted Functional Partners:
gapB
Glyceraldehyde 3-phosphate dehydrogenase, glyceraldehyde 3-phosphate dehydrogenase.
    
 0.881
AKM84295.1
1-acyl-sn-glycerol-3-phosphate acyltransferase, 1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
 0.876
AKM83886.1
Galactoside o-acetyltransferase.
    
 0.848
AKM84297.1
PAS/PAC sensor signal transduction histidine kinase.
     
 0.784
AKM84289.1
Hypothetical protein.
  
 
 0.594
AKM83907.1
NUDIX hydrolase, 7,8-dihydro-8-oxoguanine triphosphatase.
    
 0.560
AKM83721.1
Glycosyl transferase family protein.
  
 
 0.520
AKM83790.1
Group 1 glycosyl transferase.
  
 
 0.520
AKM83791.1
Group 1 glycosyl transferase.
  
 
 0.520
AKM83793.1
Group 1 glycosyl transferase.
  
 
 0.520
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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