STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKM84333.1Protein of unknown function with transmembrane region. (433 aa)    
Predicted Functional Partners:
AKM83724.1
Hypothetical protein.
    
 0.881
AKM83863.1
Seg.
    
 0.881
AKM83917.1
Haloacid dehalogenase domain-containing protein hydrolase, phosphoglycolate phosphatase.
    
  0.881
AKM84421.1
Exonuclease RNase T and DNA polymerase III, exodeoxyribonuclease X.
    
  0.736
AKM83870.1
Putative lipoprotein.
    
 0.712
AKM84053.1
Parallel beta-helix repeat-containing protein.
    
 0.712
AKM84409.1
Hypothetical protein.
    
 0.712
AKM84445.1
Putative transcriptional regulator.
    
 0.712
AKM84189.1
NusB antitermination factor, N utilization substance protein B.
    
  0.711
AKM84334.1
Hypothetical protein.
     
0.711
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.