STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheSphenylalanyl-tRNA synthetase subunit alpha, phenylalanyl-tRNA synthetase alpha chain. (244 aa)    
Predicted Functional Partners:
AKM84004.1
methionyl-tRNA synthetase, methionyl-tRNA synthetase.
  
 0.999
AKM84410.1
phenylalanyl-tRNA synthetase subunit beta, phenylalanyl-tRNA synthetase beta chain.
 
 0.999
AKM84027.1
Isoleucyl-tRNA synthetase, isoleucyl-tRNA synthetase.
  
  
 0.850
rplP
50S ribosomal protein L16, large subunit ribosomal protein L16.
  
 0.821
AKM83922.1
Polyribonucleotide nucleotidyltransferase, polyribonucleotide nucleotidyltransferase.
  
  
 0.789
fusA
fusA-3, elongation factor G, elongation factor G.
  
 
 0.783
tyrS
tyrosyl-tRNA synthetase, tyrosyl-tRNA synthetase.
  
  
 0.771
AKM83745.1
30S ribosomal protein S7, small subunit ribosomal protein S7.
  
  
 0.768
AKM84152.1
DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit alpha.
  
  
 0.757
AKM83739.1
Elongation factor Tu, elongation factor Tu.
  
  
 0.731
Your Current Organism:
Campbellbacteria bacterium GW2011OD13428
NCBI taxonomy Id: 1618633
Other names: C. Campbellbacteria bacterium GW2011_OD1_34_28, Candidatus Campbellbacteria bacterium GW2011_OD1_34_28, Parcubacteria (Campbellbacteria) bacterium GW2011_OD1_34_28
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