STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ73477.1Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1. (531 aa)    
Predicted Functional Partners:
KKQ72833.1
Hypothetical protein.
  
 
 0.894
KKQ73076.1
Stage V sporulation protein e.
 
  
 0.779
KKQ73075.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 
 0.749
KKQ72861.1
Penicillin-binding protein 2.
  
 
 0.748
KKQ72039.1
Peptidoglycan glycosyltransferase.
  
 
 0.748
KKQ73554.1
Rod shape-determining protein RodA.
    
 0.721
KKQ73494.1
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase.
  
 
 0.718
KKQ73502.1
Hypothetical protein.
 
 
 0.718
KKQ72040.1
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase.
  
 
 0.718
KKQ71883.1
Penicillin-binding protein, 1A family.
     
 0.715
Your Current Organism:
Falkowbacteria bacterium GW2011GWD23842
NCBI taxonomy Id: 1618637
Other names: C. Falkowbacteria bacterium GW2011_GWD2_38_42, Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42, Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42
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