STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ73130.1Methionyl-tRNA synthetase. (481 aa)    
Predicted Functional Partners:
KKQ73498.1
Glutamate-tRNA ligase.
  
 0.999
KKQ73260.1
Arginine-tRNA ligase.
  
 0.997
KKQ72821.1
Leucine-tRNA ligase.
  
0.996
KKQ72737.1
Isoleucine-tRNA ligase.
  
0.995
KKQ73491.1
Lysine-tRNA ligase.
  
 0.992
KKQ72865.1
Proline-tRNA ligase.
  
 0.989
KKQ73345.1
Phenylalanine-tRNA ligase beta subunit.
  
 
 0.970
KKQ73132.1
Hydrolase, TatD family.
   0.924
KKQ72619.1
Translation initiation factor IF-2.
   
 
 0.906
KKQ73360.1
Tyrosine-tRNA ligase.
  
 0.885
Your Current Organism:
Falkowbacteria bacterium GW2011GWD23842
NCBI taxonomy Id: 1618637
Other names: C. Falkowbacteria bacterium GW2011_GWD2_38_42, Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42, Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42
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