STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ72806.1Type IV secretory pathway VirB4 protein-like protein. (644 aa)    
Predicted Functional Partners:
KKQ72807.1
Hypothetical protein.
  
 0.991
KKQ72812.1
Hypothetical protein.
 
 
 0.981
KKQ73102.1
Hypothetical protein.
 
  
 0.748
KKQ72340.1
Hypothetical protein.
 
  
 0.688
KKQ73347.1
Topoisomerase protein.
  
  
 0.641
KKQ72833.1
Hypothetical protein.
  
  
 0.593
KKQ72658.1
50S ribosomal protein L19.
    
   0.593
KKQ72805.1
Hypothetical protein.
       0.576
KKQ72804.1
Hypothetical protein.
       0.456
KKQ72809.1
Hypothetical protein.
     
 0.446
Your Current Organism:
Falkowbacteria bacterium GW2011GWD23842
NCBI taxonomy Id: 1618637
Other names: C. Falkowbacteria bacterium GW2011_GWD2_38_42, Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42, Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42
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