STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ72876.1Polymerase III, delta prime subunit protein. (354 aa)    
Predicted Functional Partners:
KKQ71754.1
Polymerase III subunit beta protein.
 
 
 0.998
KKQ72390.1
Polymerase III subunit delta protein.
 
 
 0.997
KKQ73454.1
Polymerase III catalytic subunit, DnaE type protein.
  
 0.996
KKQ72579.1
Single-stranded DNA-binding protein.
   
 0.992
KKQ73104.1
Polymerase III, subunit gamma and tau protein.
  
  
 
0.931
KKQ73459.1
Replicative DNA helicase.
   
 0.898
KKQ72992.1
Polymerase III, epsilon subunit protein.
 
 0.885
KKQ73235.1
Exonuclease RNase T and DNA polymerase III.
   
 0.880
KKQ72628.1
Exonuclease.
   
 0.880
KKQ72504.1
Hypothetical protein.
   
 0.880
Your Current Organism:
Falkowbacteria bacterium GW2011GWD23842
NCBI taxonomy Id: 1618637
Other names: C. Falkowbacteria bacterium GW2011_GWD2_38_42, Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42, Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42
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