STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ72536.15-methyltetrahydrofolate-homocysteine methyltransferase. (120 aa)    
Predicted Functional Partners:
KKQ73345.1
Phenylalanine-tRNA ligase beta subunit.
    
  0.754
KKQ73130.1
Methionyl-tRNA synthetase.
    
  0.712
KKQ72041.1
Cysteine synthase.
    
  0.712
KKQ73113.1
ATP-dependent RNA helicase protein.
    
  0.699
KKQ73120.1
DEAD/DEAH box helicase domain protein.
    
  0.699
KKQ73508.1
Single-stranded-DNA-specific exonuclease RecJ.
    
  0.666
KKQ73444.1
Helicase RecQ protein.
    
  0.664
KKQ72404.1
ATP-dependent DNA helicase, RecQ family.
    
  0.664
KKQ72346.1
Hypothetical protein.
    
  0.653
KKQ73377.1
Helix-turn-helix domain protein.
    
  0.650
Your Current Organism:
Falkowbacteria bacterium GW2011GWD23842
NCBI taxonomy Id: 1618637
Other names: C. Falkowbacteria bacterium GW2011_GWD2_38_42, Candidatus Falkowbacteria bacterium GW2011_GWD2_38_42, Parcubacteria (Falkowbacteria) bacterium GW2011_GWD2_38_42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.