STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKT64153.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
KKT64150.1
Peptidase A24A domain protein.
  
  
 0.818
KKT64152.1
Hypothetical protein.
       0.773
KKT64154.1
Hypothetical protein.
       0.723
KKT64144.1
Type IV pilus assembly protein PilB.
  
 0.721
KKT64148.1
General secretion pathway protein F.
  
  
 0.666
KKT63423.1
Hypothetical protein.
  
 0.639
KKT62559.1
Type II secretion system protein E.
  
 0.639
KKT64151.1
Hypothetical protein.
       0.623
gyrA
Gyrase subunit A protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
     
 0.598
KKT64156.1
Methyltransferase type 11.
       0.594
Your Current Organism:
Giovannonibacteria bacterium GW2011GWA14429
NCBI taxonomy Id: 1618646
Other names: C. Giovannonibacteria bacterium GW2011_GWA1_44_29, Candidatus Giovannonibacteria bacterium GW2011_GWA1_44_29, Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA1_44_29
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.