STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW11874.1GTP pyrophosphokinase. (566 aa)    
Predicted Functional Partners:
KKW11852.1
30S ribosomal protein S13.
    
  0.973
KKW12356.1
50S ribosomal protein L3.
    
  0.973
KKW12086.1
30S ribosomal protein S15.
   
   0.968
KKW12365.1
30S ribosomal protein S17.
    
   0.968
KKW12368.1
50S ribosomal protein L5.
    
   0.968
KKW12370.1
50S ribosomal protein L6.
    
   0.968
KKW12373.1
Ribosomal protein L15.
   
   0.968
KKW12372.1
30S ribosomal protein S5.
   
 
 0.967
KKW12359.1
50S ribosomal protein L2.
   
   0.966
KKW12403.1
50S ribosomal protein L11.
   
 
 0.966
Your Current Organism:
Jorgensenbacteria bacterium GW2011GWB1499
NCBI taxonomy Id: 1618664
Other names: C. Jorgensenbacteria bacterium GW2011_GWB1_49_9, Candidatus Jorgensenbacteria bacterium GW2011_GWB1_49_9, Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.