STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW11956.1Polysaccharide biosynthesis protein. (490 aa)    
Predicted Functional Partners:
KKW12431.1
UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.925
KKW11989.1
dTDP-glucose 4,6-dehydratase.
  
  
 0.920
KKW11985.1
Nucleotidyl transferase.
  
  
 0.904
KKW12327.1
Glycosyl transferase.
  
 
 0.834
KKW11961.1
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.805
KKW11993.1
Hypothetical protein.
 
  
 0.801
KKW11958.1
Hypothetical protein.
  
  
 0.781
KKW12325.1
Protein tyrosine phosphatase.
  
 
 0.736
KKW12638.1
UDP-glucose/GDP-mannose dehydrogenase.
  
  
 0.687
KKW12292.1
Methionine-tRNA ligase.
  
 
 0.658
Your Current Organism:
Jorgensenbacteria bacterium GW2011GWB1499
NCBI taxonomy Id: 1618664
Other names: C. Jorgensenbacteria bacterium GW2011_GWB1_49_9, Candidatus Jorgensenbacteria bacterium GW2011_GWB1_49_9, Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9
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