STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW12343.1Nucleoside diphosphate kinase. (201 aa)    
Predicted Functional Partners:
KKW11846.1
30S ribosomal protein S9.
  
  0.999
KKW11851.1
Ribosomal protein S11, bacterial-type.
  
  0.999
KKW11881.1
Hypothetical protein.
   
  0.999
KKW12086.1
30S ribosomal protein S15.
  
  0.999
KKW12350.1
30S ribosomal protein S12.
  
  0.999
KKW12351.1
30S ribosomal protein S7.
   
  0.999
KKW12355.1
30S ribosomal protein S10.
   
  0.999
KKW12372.1
30S ribosomal protein S5.
  
  0.999
KKW12416.1
30S ribosomal protein S16.
  
  0.999
KKW12420.1
30S ribosomal protein S2.
   
 0.999
Your Current Organism:
Jorgensenbacteria bacterium GW2011GWB1499
NCBI taxonomy Id: 1618664
Other names: C. Jorgensenbacteria bacterium GW2011_GWB1_49_9, Candidatus Jorgensenbacteria bacterium GW2011_GWB1_49_9, Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9
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