STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW12413.1N utilization substance protein B-like protein. (154 aa)    
Predicted Functional Partners:
KKW12355.1
30S ribosomal protein S10.
   
 0.999
KKW12119.1
NusA antitermination factor.
  
 0.992
KKW12414.1
Ribonuclease 3.
 
  
 0.980
KKW11883.1
DNA-directed RNA polymerase subunit beta.
  
 0.965
KKW11849.1
DNA-directed RNA polymerase subunit alpha.
  
 0.962
KKW11882.1
DNA-directed RNA polymerase subunit beta'.
  
 0.961
KKW12402.1
Transcription antitermination protein nusG.
   
 0.927
KKW11936.1
Methionyl-tRNA formyltransferase.
  
 
 0.923
KKW11850.1
30S ribosomal protein S4.
   
 
 0.900
KKW12112.1
Bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase.
  
  
 0.844
Your Current Organism:
Jorgensenbacteria bacterium GW2011GWB1499
NCBI taxonomy Id: 1618664
Other names: C. Jorgensenbacteria bacterium GW2011_GWB1_49_9, Candidatus Jorgensenbacteria bacterium GW2011_GWB1_49_9, Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9
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