STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW23774.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
KKW23775.1
Type IV pilus assembly protein PilM.
      0.976
KKW23776.1
Hypothetical protein.
       0.773
KKW23773.1
Methionine-tRNA ligase.
  
    0.685
KKW22976.1
Hypothetical protein.
  
 
 0.675
KKW23772.1
Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.673
KKW23771.1
FAD synthase.
       0.662
KKW23777.1
Hypothetical protein.
       0.658
KKW23778.1
Hypothetical protein.
       0.658
KKW23869.1
Type II secretion system F domain-containing protein.
   
 
 0.512
KKW22813.1
Type IV pilin.
   
 
 0.512
Your Current Organism:
Kaiserbacteria bacterium GW2011GWA25212
NCBI taxonomy Id: 1618671
Other names: C. Kaiserbacteria bacterium GW2011_GWA2_52_12, Candidatus Kaiserbacteria bacterium GW2011_GWA2_52_12, Parcubacteria (Kaiserbacteria) bacterium GW2011_GWA2_52_12
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