STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKW23237.1Hypothetical protein; Belongs to the bacterial histone-like protein family. (91 aa)    
Predicted Functional Partners:
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.659
KKW24784.1
Polymerase protein.
   
 
 0.648
rny
Ribonuclease Y; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.
       0.552
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.
  
  
 0.533
KKW23773.1
Methionine-tRNA ligase.
  
   0.464
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.436
KKW24868.1
PAS/PAC sensor hybrid histidine kinase.
  
  
 0.422
KKW24466.1
RNA binding S1 domain protein.
  
  
 0.415
Your Current Organism:
Kaiserbacteria bacterium GW2011GWA25212
NCBI taxonomy Id: 1618671
Other names: C. Kaiserbacteria bacterium GW2011_GWA2_52_12, Candidatus Kaiserbacteria bacterium GW2011_GWA2_52_12, Parcubacteria (Kaiserbacteria) bacterium GW2011_GWA2_52_12
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