STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR20800.1AAA ATPase. (533 aa)    
Predicted Functional Partners:
KKR20702.1
Polymerase III subunit beta protein.
  
 
 0.865
KKR20216.1
Peptidase M10A and M12B matrixin and adamalysin.
 
 
 0.859
KKR20536.1
Primase protein.
  
 
 0.839
KKR20976.1
Topoisomerase protein.
   
 
 0.832
KKR20519.1
DNA/RNA helicase, superfamily I.
  
 
 0.822
KKR20905.1
Primary replicative DNA helicase.
    
 0.818
KKR20799.1
Arginine-tRNA ligase.
  
    0.753
KKR20798.1
Deoxyuridine 5'-triphosphate nucleotidohydrolase.
  
    0.747
KKR20962.1
Polymerase III subunit delta protein.
   
 0.663
KKR20694.1
Polymerase protein.
  
 
 0.662
Your Current Organism:
Nomurabacteria bacterium GW2011GWC23941
NCBI taxonomy Id: 1618754
Other names: C. Nomurabacteria bacterium GW2011_GWC2_39_41, Candidatus Nomurabacteria bacterium GW2011_GWC2_39_41, Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_39_41
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