STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ57055.1Glycosyl transferase group 1. (369 aa)    
Predicted Functional Partners:
KKQ57056.1
Hypothetical protein.
  
 
 0.906
KKQ57199.1
PEP-CTERM system TPR-repeat lipoprotein.
  
 0.900
KKQ57885.1
Nucleotidyl transferase family.
  
 0.876
KKQ57840.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
  0.669
KKQ57837.1
Glucose-1-phosphate thymidyltransferase.
  
 
  0.655
KKQ57822.1
Polysaccharide biosynthesis protein.
  
 
  0.574
KKQ56127.1
Hypothetical protein.
  
 
  0.574
cysS
Cysteine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.535
KKQ57842.1
dTDP-4-dehydrorhamnose 3,5-epimerase related protein.
  
    0.521
KKQ55248.1
Bifunctional protein GlmU.
  
  0.517
Your Current Organism:
Parcubacteria group bacterium GW2011GWA23813b
NCBI taxonomy Id: 1618780
Other names: P. group bacterium GW2011_GWA2_38_13b, Parcubacteria group bacterium GW2011_GWA2_38_13b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.