STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ56558.1Type IV pilin. (389 aa)    
Predicted Functional Partners:
KKQ56562.1
Type IV-A pilus assembly ATPase PilB.
 
 0.976
KKQ57806.1
Hypothetical protein.
 
 0.966
KKQ57421.1
Type II secretion system protein E.
 
 0.966
KKQ56559.1
Twitching motility protein.
 
  
 0.867
KKQ56561.1
General secretion pathway protein G.
  
  
 0.757
KKQ56566.1
Type IV pilus biogenesis ATPase PilM.
 
 
 
 0.723
KKQ57520.1
Single-stranded DNA-binding protein.
  
    0.712
KKQ56557.1
Pilin.
  
  
 0.709
KKQ57426.1
Type IV pilus assembly protein PilM.
 
 
 
 0.678
KKQ57423.1
Hypothetical protein.
  
  
 0.666
Your Current Organism:
Parcubacteria group bacterium GW2011GWA23813b
NCBI taxonomy Id: 1618780
Other names: P. group bacterium GW2011_GWA2_38_13b, Parcubacteria group bacterium GW2011_GWA2_38_13b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.