STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ56272.1Hypothetical protein. (618 aa)    
Predicted Functional Partners:
KKQ56274.1
Hypothetical protein.
 
     0.898
KKQ56275.1
Hypothetical protein.
 
     0.893
KKQ56276.1
Type IV secretory pathway VirB4 component-like protein.
 
     0.836
rsmA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
     0.796
KKQ56271.1
Hypothetical protein.
       0.732
KKQ56270.1
Hypothetical protein.
       0.726
KKQ56273.1
Hypothetical protein.
       0.718
KKQ56268.1
Hypothetical protein.
       0.697
KKQ56269.1
Hypothetical protein.
       0.697
KKQ56014.1
Transmembrane protein.
  
     0.643
Your Current Organism:
Parcubacteria group bacterium GW2011GWA23813b
NCBI taxonomy Id: 1618780
Other names: P. group bacterium GW2011_GWA2_38_13b, Parcubacteria group bacterium GW2011_GWA2_38_13b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.