STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ55913.1Putative transcriptional regulator. (209 aa)    
Predicted Functional Partners:
KKQ57635.1
Hypothetical protein.
  
     0.564
KKQ55914.1
Hypothetical protein.
       0.547
KKQ55075.1
Hypothetical protein.
  
     0.525
KKQ57758.1
Transcriptional regulator, TrmB.
  
     0.469
KKQ57749.1
Malate dehydrogenase (Oxaloacetate-decarboxylating).
    
  0.425
KKQ57750.1
Malate dehydrogenase.
    
  0.425
KKQ56260.1
Hypothetical protein; Belongs to the UPF0102 family.
  
     0.415
Your Current Organism:
Parcubacteria group bacterium GW2011GWA23813b
NCBI taxonomy Id: 1618780
Other names: P. group bacterium GW2011_GWA2_38_13b, Parcubacteria group bacterium GW2011_GWA2_38_13b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.