STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKQ55417.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
KKQ55416.1
ATP-dependent endonuclease of the OLD family.
     0.987
KKQ55415.1
Hypothetical protein.
 
   
 0.953
KKQ55414.1
Restriction modification system DNA specificity domain protein.
  
    0.944
KKQ55418.1
Type I restriction modification enzyme M chain.
  
  
 0.891
KKQ55413.1
Hypothetical protein.
       0.574
KKQ57790.1
Hypothetical protein.
  
  
 0.540
KKQ57199.1
PEP-CTERM system TPR-repeat lipoprotein.
  
    0.483
Your Current Organism:
Parcubacteria group bacterium GW2011GWA23813b
NCBI taxonomy Id: 1618780
Other names: P. group bacterium GW2011_GWA2_38_13b, Parcubacteria group bacterium GW2011_GWA2_38_13b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.