STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKR54489.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
KKR54509.1
Hypothetical protein.
  
     0.770
KKR54367.1
MutT/NUDIX family protein.
  
     0.591
KKR54490.1
Hypothetical protein.
       0.498
KKR55075.1
Cation efflux protein.
  
     0.460
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
  
     0.430
Your Current Organism:
Parcubacteria group bacterium GW2011GWA24023
NCBI taxonomy Id: 1618816
Other names: P. group bacterium GW2011_GWA2_40_23, Parcubacteria group bacterium GW2011_GWA2_40_23
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.